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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015913285.1_cds_XP_016463337.1_56469
CDS Infomation

[gene=LOC107786384] [db_xref=GeneID:107786384] [protein=serine/threonine-protein kinase Nek2-like] [protein_id=XP_016463337.1] [location=join(6998..7083,7235..7301,7758..7823,8362..8408,8537..8582,8703..8783,8866..8908,8981..9030,9111..9192,9271..9320,10300..10373,10480..10531,10669..11118,11297..11929)] [gbkey=CDS]
Sequence

ATGGAAAATTATGAGATCTTGGAGCAGGTGGGGAAAGGTTCCTTTGGCTCTGCACTACTT
GTAAGGCATAAACAAGAAAAGAAGAAATATGTTATGAAAAAAATTCGCTTAGCTCGCCAG
ACAGAGAGAACACGCAGATCTGCCCACCAGGAGATGGAACTGATCTCAAGAATACAAAGT
CCATTTGTGGTGGAATACAAAGATTCCTGGGTGGAAAAGGGATGCTACGTGTGCATTATT
ATTGGGTATTGTGAAGGAGGTGATATGGCAGATGCTATTAAGAGAGCTAATGGTGTTCTT
TTCCCTGAGGAGAAGCTTTGTAAGTGGCTAGTTCAACTTCTGATGGCACTTGATCACTTG
CATACGAACCATATAATTCACTGTGATGTCAAGTGCTCAAATATTTTTCTGACTAAAGAG
CACGATATACGTCTAGGTGATTTTGGTCTTGCTAAAATACTGTCTTCGGATGATCTTGCT
TCCTCTGTGGTGGGTACCCCAAGTTATATGTGTCCCGAGCTTCTTGCTGATATACCCTAT
GGTTGTAAATCAGACATCTGGTCTTTGGGTTGCTGCATGTATGAAATGACTGCTTACAAG
CCGGCATTCAAAGCATTTGATATGCAAGGTCTAATTAACAAAATTAACAAATGTATAGTT
GCTCCACTTCCCACCACGTATTCTGGTGCATTCCGTGGCCTTATTAAGAGTATGCTAAGG
AAAAACCCAGAACTCAGGCCAAGTGCTGCAGATTTACTCCGACATCCCCATCTTCAACCC
TATGTGTTAAAAATCCTTCTGAATTCTGACAGCCCTAGACAGCACAAGTTCCACGTCCAG
CCCTCTAATTCAAACTATGTAAAGAAAAAAAGATTTTCTGAGCCTAGAGTTGCTCCAGTC
TTCACTGAAAGAGAGCAGAGGCGATTGTCCAGTGATAGGGCTTTGAACCCTAGTATTTCT
GGTACGGGTTCTCCATGTTTATCCCGGAGAGCAAAAGATCTAATGAGTTCTTTGAAGAAA
AACTATTCAGAGCCGTCTGTTGAAAGTACTCCTTATGACGTAAAAAGTTCTGCTATCTCA
AAGTTGTCAGCTGCTGTCAAAACTGTGCGATTTAATTCAAATAGAAATTCCACACCTCAG
AGGAGACAGAGCACTCCATTAAAGATGTCCAATGCTGGTTCTACCCGTGAACTGCTTCCA
GTGACACATACACCAGTTAGCCAACCGTCCAAGTCAACGCGTAGAAATTCTCTTCCTTTA
TCAACAAAAGCTGGGAAGTTGGAGTCGCCTTACAAACATAATGTTGGTCTTCTTCACCAA
GTGAAGTCTCCGGATGTCTCTGTGAATGCTCCAAGAATTGACAAGATGGTTGATCCCTTG
GCTTCTTCAGAAGATCCTCTTTTGCCCATCCAGAGAGCTTCACCAAAATCTGTTCAGTTG
TCTTCCCCCTCACCACGCTATAGTGACTGGTCGTTCACAAAAGACAAGTGTACAGTACAG
GTTGTTGACAGAAGCTTTCCCAAGCCACCTTTAATTGACCCTATTCATGGAATTGCGCGG
ATTGGAAGTGAATGTTCAGAACATAATGCAACAACTGGCGCTTCAAGCCGGTCATCTTCA
GAATCTCGTCCCCGGAGGTTTGACACCTCTTCTTACCAGCAACGTTCTGAAGCCTTAGAA
GGATTACTTGAGTTCAGTGCTCAACTATTGCAGCAAGAGCGTTTAGAAGAGCTTACAGTG
TTACTGAAGCCATTTGGGCCAGAAAAGGTTTCTCCAAGGGAAACTGCTATCTGGCTGACT
AAGAGTTTCAAGGAGAAGGGAGTGTAA

Peptide Sequence

PEP ID

XP_016463337.1
PEP Infomation

PREDICTED: serine/threonine-protein kinase Nek2-like [Nicotiana tabacum]
Sequence

MENYEILEQVGKGSFGSALLVRHKQEKKKYVMKKIRLARQTERTRRSAHQEMELISRIQS
PFVVEYKDSWVEKGCYVCIIIGYCEGGDMADAIKRANGVLFPEEKLCKWLVQLLMALDHL
HTNHIIHCDVKCSNIFLTKEHDIRLGDFGLAKILSSDDLASSVVGTPSYMCPELLADIPY
GCKSDIWSLGCCMYEMTAYKPAFKAFDMQGLINKINKCIVAPLPTTYSGAFRGLIKSMLR
KNPELRPSAADLLRHPHLQPYVLKILLNSDSPRQHKFHVQPSNSNYVKKKRFSEPRVAPV
FTEREQRRLSSDRALNPSISGTGSPCLSRRAKDLMSSLKKNYSEPSVESTPYDVKSSAIS
KLSAAVKTVRFNSNRNSTPQRRQSTPLKMSNAGSTRELLPVTHTPVSQPSKSTRRNSLPL
STKAGKLESPYKHNVGLLHQVKSPDVSVNAPRIDKMVDPLASSEDPLLPIQRASPKSVQL
SSPSPRYSDWSFTKDKCTVQVVDRSFPKPPLIDPIHGIARIGSECSEHNATTGASSRSSS
ESRPRRFDTSSYQQRSEALEGLLEFSAQLLQQERLEELTVLLKPFGPEKVSPRETAIWLT
KSFKEKGV

Transcript Sequence

Gene sequence data has not been registered.